De novo transcriptome assembly of the lobster cockroach Nauphoeta cinerea (Blaberidae)



Título del documento: De novo transcriptome assembly of the lobster cockroach Nauphoeta cinerea (Blaberidae)
Revue: Genetics and molecular biology
Base de datos: PERIÓDICA
Número de sistema: 000420068
ISSN: 1415-4757
Autores: 1
1
1
1
Instituciones: 1Universidade Federal de Santa Maria, Departamento de Bioquimica e Biologia Molecular, Santa Maria, Rio Grande do Sul. Brasil
Año:
Periodo: Sep
Volumen: 41
Número: 3
Paginación: 713-721
País: Brasil
Idioma: Inglés
Tipo de documento: Artículo
Enfoque: Experimental
Resumen en inglés The use of Drosophila as a scientific model is well established, but the use of cockroaches as experimental organisms has been increasing, mainly in toxicology research. Nauphoeta cinerea is one of the species that has been studied, and among its advantages is its easy laboratory maintenance. However, a limited amount of genetic data about N. cinerea is available, impeding gene identification and expression analyses, genetic manipulation, and a deeper understanding of its functional biology. Here we describe the N. cinerea fat body and head transcriptome, in order to provide a database of genetic sequences to better understand the metabolic role of these tissues, and describe detoxification and stress response genes. After removing low-quality sequences, we obtained 62,121 transcripts, of which more than 50% had a length of 604 pb. The assembled sequences were annotated according to their genes ontology (GO). We identified 367 genes related to stress and detoxification; among these, the more frequent were p450 genes. The results presented here are the first large-scale sequencing of N. cinerea and will facilitate the genetic understanding of the species’ biochemistry processes in future works
Disciplinas: Biología,
Química,
Medicina
Palabras clave: Insectos,
Bioquímica,
Genética,
Nauphoeta cinerea,
Ensamblaje,
Cuerpo graso,
Desintoxicación
Keyword: Insects,
Biochemistry,
Genetics,
Nauphoeta cinerea,
assembly,
Fat body,
Detoxification
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