Comparative and phylogenetic analyses of Swertia L. (Gentianaceae) medicinal plants (from Qinghai, China) based on complete chloroplast genomes



Título del documento: Comparative and phylogenetic analyses of Swertia L. (Gentianaceae) medicinal plants (from Qinghai, China) based on complete chloroplast genomes
Revue: Genetics and molecular biology
Base de datos: PERIÓDICA
Número de sistema: 000459235
ISSN: 1415-4757
Autores: 1
2
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2
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Instituciones: 1Zhengzhou University, School of Life Sciences, Zhengzhou, Henan. China
2Qinghai Normal University, School of Life Sciences, Xining, Qinghai. China
Año:
Volumen: 45
Número: 1
País: Brasil
Idioma: Inglés
Tipo de documento: Artículo
Enfoque: Experimental, analítico
Resumen en inglés Swertia L. is a large genus in Swertiinae (Gentianaceae). In China, many Swertia species are used as traditional Tibetan medicines, known as “Zangyinchen” or “Dida”. However, the phylogenetic relationships among Swertia medicinal plants and their wild relatives have remained unclear. In this study, we sequenced and assembled 16 complete chloroplast (cp) genomes of 10 Swertia species, mainly distributed in Qinghai Province, China. The results showed that these species have typical structures and characteristics of plant cp genomes. The sizes of Swertia cp genomes are ranging from 149,488 bp to 154,097 bp. Most Swertia cp genomes presented 134 genes, including 85 protein coding genes, eight rRNA genes, 37 tRNA genes, and four pseudogenes. Furthermore, the GC contents and boundaries of cp genomes are similar among Swertia species. The phylogenetic analyses indicated that Swertia is a complex polyphyletic group. In addition, positive selection was found in psaI and petL genes, indicating the possible adaptation of Qinghai Swertia species to the light environment of the Qinghai-Tibet plateau. These new cp genome data could be further investigated to develop DNA barcodes for Swertia medicinal plants and for additional systematic studies of Swertia and Swertiinae species
Disciplinas: Biología
Palabras clave: Genética,
Botánica,
Evolución y filogenia,
Swertia,
Gentianaceae,
Plantas medicinales,
China,
Genoma,
Cloroplastos
Keyword: Genetics,
Botany,
Evolution and phylogeny,
Swertia,
Gentianaceae,
Chloroplasts,
Genome,
Medicinal plants,
China
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