Validation of computationally predicted substrates for laccase



Document title: Validation of computationally predicted substrates for laccase
Journal: Brazilian archives of biology and technology
Database: PERIÓDICA
System number: 000388253
ISSN: 1516-8913
Authors: 1
1
1
2
Institutions: 1Council of Scientific and Industrial Research, Institute of Genomics and Integrative Biology, Nueva Delhi, Delhi. India
2National Institute of Immunology, Nueva Delhi, Delhi. India
Year:
Season: Sep-Oct
Volumen: 57
Number: 5
Pages: 803-809
Country: Brasil
Language: Inglés
Document type: Nota breve o noticia
Approach: Experimental
English abstract Present study reports the validation (oxidation) of computationally predicted oxidation of xenobiotic contaminants by commercially available pure laccase from Trametes versicolor. Selected contaminants were predicted as potential targets for laccase oxidation by using in-silico docking tool. The oxidation by laccase was measured by change in absorbance at specific λ max of each compound. Sinapic acid and tyrosine were taken as positive and negative controls, respectively. Oxidation was observed in m-chlorophenol, 2,4 di-chlorophenol, 2,4,6 tri-chlorophenol, captan, atrazine and thiodicarb, except malathion, which showed no activity. It could be speculated that the predicted substrates showing oxidation shared homology at structural and chemical level with positive control compounds. In case of malathion, structural non-homology with sinapic acid could be attributed to its inactivity towards laccase that required further structural analysis. Thus, a remediation tool proposing an advanced remediation approach combining the application of theoretical in-silico method and subsequent experimental validation using pure laccase could be proposed. As number and type of xenobiotics increase, the unfeasibility to screen them experimentally for bioremediation also rise. This approach would be useful to reduce the time and cost required in other screening methods
Disciplines: Biología
Keyword: Ecología,
Biotecnología,
Xenobióticos,
Contaminación ambiental,
Biodegradación,
Sustratos experimentales,
Lacasa
Keyword: Biology,
Ecology,
Biotechnology,
Xenobiotics,
Environmental pollution,
Biodegradation,
Experimental substrates,
Laccase
Full text: Texto completo (Ver HTML)