Shotgun metagenomic sequencing of the first case of monkeypox virus in Brazil, 2022



Título del documento: Shotgun metagenomic sequencing of the first case of monkeypox virus in Brazil, 2022
Revista: Revista do Instituto de Medicina Tropical de Sao Paulo
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Número de sistema: 000547863
ISSN: 0036-4665
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Institucions: 1Universidade de São Paulo, Faculdade de Medicina, São Paulo, São Paulo. Brasil
2Imperial College London, MRC Centre for Global Infectious Disease Analysis, London. Reino Unido
3University of Oxford, Department of Zoology, Oxford. Reino Unido
4Instituto de Infectologia Emílio Ribas, São Paulo, São Paulo. Brasil
5Universidade Federal do Rio de Janeiro, Instituto de Biologia, Rio de Janeiro, Rio de Janeiro. Brasil
6University of Edinburgh, Institute of Ecology and Evolution, Edinburgh. Reino Unido
7University of Birmingham, School of Biosciences, Birmingham. Reino Unido
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Volum: 64
País: Brasil
Idioma: Inglés
Resumen en inglés Monkeypox virus (MPXV), a zoonotic virus endemic to the African continent, has been reported in 33 non-endemic countries since May 2022. We report an almost complete genome of the first confirmed case of MPXV in Brazil. Shotgun metagenomic sequencing was completed in 18 hours, from DNA extraction to consensus sequence generation.
Keyword: Viral metagenomics,
Monkeypox virus,
West African clade,
Genomic surveillance,
Brazil
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