PCR-RFLP analysis of non-coding regions of cpDNA in Araucaria angustifolia (Bert.) O. Kuntze



Título del documento: PCR-RFLP analysis of non-coding regions of cpDNA in Araucaria angustifolia (Bert.) O. Kuntze
Revista: Genetics and molecular biology
Base de datos: PERIÓDICA
Número de sistema: 000347633
ISSN: 1415-4757
Autores: 1
2
3
Instituciones: 1Universidade Federal de Santa Catarina, Centro de Ciencias Biologicas, Florianopolis, Santa Catarina. Brasil
2Universidade Estadual de Campinas, Centro de Biologia Molecular e Engenharia Genetica, Campinas, Sao Paulo. Brasil
3Universidade Federal de Santa Catarina, Centro de Ciencias Agrarias, Florianopolis, Santa Catarina. Brasil
Año:
Periodo: Jun
Volumen: 30
Número: 2
Paginación: 423-427
País: Brasil
Idioma: Inglés
Tipo de documento: Artículo
Enfoque: Experimental
Resumen en inglés The Araucaria angustifolia (Bert.) O. Kuntze, also named the “paraná pine” (‘pinheiro-do-Paraná’ in Portuguese), is a native conifer species naturally occurring in the Brazilian Tropical Atlantic Forest which in Brazil is mostly limited to the southern Brazilian states of Paraná, Santa Catarina and Rio Grande do Sul. Chloroplast DNA markers (cpDNA) are useful in populational genetic studies because of their low substitution rate and the uniparental transmission. The conservation of cpDNA genes between species has allowed the design of consensus chloroplast primers that have had a great impact on population genetics and phylogenetic studies. In this study we used the polymerase chain reaction technique combined with restriction enzyme fragment length polymorphism (PCR-RFLP) to characterize the genetic diversity of the chloroplast genome in nine natural A. angustifolia populations. Among the 141 trees surveyed we found 12 different cpDNA haplotypes and demonstrated that A. angustifolia has high levels of total diversity (hT = 0.612) and an average within-population diversity (hS) of 0.441, suggesting the presence of high withinpopulation variation. The estimated genetic divergence could be helpful in designing breeding programs and species conservation strategies, although additional studies with a larger number of populations and trees is essential for a better understanding of gene flow and the inheritance of major Araucaria angustifolia traits
Disciplinas: Biología
Palabras clave: Botánica,
Ecología,
Genética,
Haplotipos,
Coníferas,
Diversidad genética,
Pino brasileño,
Araucaria angustifolia
Keyword: Biology,
Botany,
Ecology,
Genetics,
Haplotypes,
Conifers,
Genetic diversity,
Brazilian pine tree,
Araucaria angustifolia
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