Genetic diversity and population structure analysis of strawberry (Fragaria x ananassa Duch.) using SSR markers



Título del documento: Genetic diversity and population structure analysis of strawberry (Fragaria x ananassa Duch.) using SSR markers
Revista: Electronic journal of biotechnology
Base de datos: PERIÓDICA
Número de sistema: 000358464
ISSN: 0717-3458
Autores: 1
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Instituciones: 1Kongju National University, Department of Plant Resources, Yesan. Corea del Sur
2National Institute of Horticultural & Herbal Science, Vegetable Research Division, Suwon. Corea del Sur
3National Horticultural Research Institute, Protected Horticulture Experiment Station, Busan. Corea del Sur
4National Institute of Horticultural & Herbal Science, Department of Horticultural Crop Research, Suwon. Corea del Sur
5The Foundation of Agricultural Technology Commercialization and Transfer, Suwon. Corea del Sur
6Chungcheongnam-do Agricultural Research & Extension Services, Yesan. Corea del Sur
7National Agrobiodiversity Center, National Institute of Agricultural Biotechnology, Suwon. Corea del Sur
Año:
Volumen: 15
Número: 2
País: Chile
Idioma: Inglés
Tipo de documento: Artículo
Enfoque: Experimental, aplicado
Resumen en inglés In total, 18 simple sequence repeat (SSR) markers were used to analyze the genetic diversity and population structure of 59 accessions of cultivated strawberry (Fragaria x ananassa Duch.) from Korea, Germany, United States, United Kingdom, and Japan. In total, 101 alleles were detected with an average of 5.6 per locus and 21 specific alleles were identified. Notably, one genotype (Blonoli from Germany) possessed a maximum of 10 different unique alleles specific to each genotype. The gene diversity varied from 0.027 (EMPaEKO1B) to 0.791 (CFACT110), with an average value of 0.509. PIC values ranged from 0.026 to 0.762 (average 0.454). A model-based structure analysis revealed the presence of two populations. The accessions that were clearly assigned to a single population in which > 70% of their inferred ancestry was derived from one of the model-based populations. However, two accessions (3.4%) in the sample were categorized as having admixed ancestry. Here, we report detailed information on commercially grown strawberry accessions from five different origins using SSR markers. These results couldbe used for broadening the genetic base of commercially grown varieties
Disciplinas: Agrociencias
Palabras clave: Biotecnología,
Genética,
Mejoramiento genético,
Marcadores moleculares,
Secuencias simples repetidas,
Diversidad genética,
Fresa,
Fragaria
Keyword: Agricultural sciences,
Biotechnology,
Genetics,
Plant breeding,
Molecular markers,
Simple sequence repeats,
Genetic diversity,
Strawberry,
Fragaria
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