Dark breather using symmetric Morse, solvent and external potentials for DNA breathing



Título del documento: Dark breather using symmetric Morse, solvent and external potentials for DNA breathing
Revista: Ecletica quimica
Base de datos:
Número de sistema: 000552656
ISSN: 0100-4670
Autores: 4
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Instituciones: 1Universidad Nacional del Callao, Facultad de Ciencias de la Salud, Callao, Bellavista. Perú
2Universidad Nacional de Trujillo, Trujillo, La Libertad. Perú
3Universidad Inca Garcilaso de la Vega, Lima. Perú
4Universidad Privada San Juan Bautista, Chorrillos, Lima. Perú
Año:
Volumen: 43
Número: 4
Paginación: 44-49
País: Brasil
Idioma: Inglés
Tipo de documento: Artículo
Resumen en inglés We analyze the dynamics and the quantum thermodynamics of DNA in Symmetric-Peyrard-Bishop-Dauxois model (S-PBD) with solvent and external potentials and describe the transient conformational fluctuations using dark breather and the ground state wave function of the associate Schrodinger differential equation.  We used the S-PBD, the Floquet theory, quantum thermodynamic and finite difference methods. We show that for lower coupling dark breather is present.  We estimate the fluctuations or breathing of DNA. For the S-PBD model we have the stability of dark breather for k<0.004 and mobile breathers with coupling k=0.004. The fluctuations of the dark breather in the S-PBD model is approximately zero with the quantum thermodynamics. The viscous and external potential effect is direct proportional to hydrogen bond stretching.
Disciplinas: Química
Palabras clave: Fisicoquímica y química teórica
Keyword: Physical and theoretical chemistry
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