Genome-wide identification, classification and transcriptional analysis of nitrate and ammonium transporters in Coffea



Document title: Genome-wide identification, classification and transcriptional analysis of nitrate and ammonium transporters in Coffea
Journal: Genetics and molecular biology
Database: PERIÓDICA
System number: 000408515
ISSN: 1415-4757
Authors: 1
2
1
1
1
Institutions: 1Instituto Agronomico do Parana, Laboratorio de Biotecnologia Vegetal, Londrina, Parana. Brasil
2Universidade Federal de Minas Gerais, Instituto de Ciencias Biologicas, Belo Horizonte, Minas Gerais. Brasil
Year:
Volumen: 40
Pages: 346-359
Country: Brasil
Language: Inglés
Document type: Artículo
Approach: Experimental, aplicado
English abstract Nitrogen (N) is quantitatively the main nutrient required by coffee plants, with acquisition mainly by the roots and mostly exported to coffee beans. Nitrate (NO3–) and ammonium (NH4+) are the most important inorganic sources for N uptake. Several N transporters encoded by different gene families mediate the uptake of these compounds. They have an important role in source preference for N uptake in the root system. In this study, we performed a genome-wide analysis, including in silico expression and phylogenetic analyses of AMT1, AMT2, NRT1/PTR, and NRT2 transporters in the recently sequenced Coffea canephora genome. We analyzed the expression of six selected transporters in Coffea arabica roots submitted to N deficiency. N source preference was also analyzed in C. arabica using isotopes. C. canephora N transporters follow the patterns observed for most eudicots, where each member of the AMT and NRT families has a particular role in N mobilization, and where some of these are modulated by N deficiency. Despite the prevalence of putative nitrate transporters in the Coffea genome, ammonium was the preferential inorganic N source for N-starved C. arabica roots. This data provides an important basis for fundamental and applied studies to depict molecular mechanisms involved in N uptake in coffee trees
Disciplines: Biología,
Agrociencias
Keyword: Fisiología vegetal,
Frutales,
Café,
Nutrición mineral,
Transporte de nutrientes,
Nitrógeno,
Regulación génica,
Coffea canephora,
Coffea arabica,
Rubiaceae
Keyword: Biology,
Agricultural sciences,
Plant physiology,
Fruit trees,
Coffee,
Mineral nutrition,
Nutrients transport,
Nitrogen,
Gene regulation,
Coffea canephora,
Coffea arabica,
Rubiaceae
Full text: Texto completo (Ver HTML)